研究成果

1. 論文業績(査読有)

戸澤教授
Teng Ma, Madoka Sato, Maki Komiya, Kensaku Kanomata, Takaya Watanabe, Xingyao Feng, Ryusuke Miyata, Daisuke Tadaki, Fumihiko Hirose, Yuzuru Tozawa, Ayumi Hirano-Iwata. Lateral voltage as a new input for artificial lipid bilayer systems. Faraday Discussions (2021) accepted
Natsuki Takamura, Akihiko Yamazaki, Nozomi Sakuma, Sakiko Hirose, Yukie Takani, Satoshi Yamashita, Motonari Sakai, Masahiro Oshima, Makoto Kuroki, Yuzuru Tozawa. Catalytic Promiscuity of Rice 2-Oxoglutarate/Fe(II)–Dependent Dioxygenases Supports Xenobiotic Metabolism. Plant Physiology (2021) doi.org/10.1093/plphys/kiab293
Arif Nurkanto, Ghulam Jeelani, Herbert J Santos, Yulia Rahmawati, Mihoko Mori, Yumi Nakamura, Kana Goto, Yuko Saikawa, Takeshi Annoura, Yuzuru Tozawa, Takaya Sakura, Daniel Ken Inaoka, Kazuro Shiomi, Tomoyoshi Nozaki. Characterization of Plasmodium falciparum pantothenate kinase and identification of its inhibitors from microbial natural products. Frontiers in Cellular and Infection Microbiology 11: 639065 (2021) doi. org/10.3389/fcimb.2021.639065.
Akira Nozawa, Daisuke Ito, Mohamed Ibrahim, Herbert Santos, Takafumi Tsuboi, Yuzuru Tozawa. Characterization of mitochondrial carrier proteins of malaria parasite Plasmodium falciparum based on in vitro translation and reconstitution. Parasitology International. 79: 102160 (2020)
Kakeru Suzuki, Haruka Inoue, Satoshi Matsuoka, Ryugo Tero, Ayumi Hirano-Iwata, Yuzuru Tozawa. Establishment of a cell-free translation system from rice callus extracts. Biosci Biotechnol Biochem. 84:issue10 (2020)
Herbert Santos, Kenichiro Imai, Takashi Makiuchi, Kentaro Tomii, Paul Horton, Akira Nozawa, Kenta Okada, Yuzuru Tozawa, Tomoyoshi Nozaki. Novel lineage-specific transmembrane β-barrel proteins in the endoplasmic reticulum of Entamoeba histolytica. FEBS J 286(17):3416-3432. doi: 10.1111/febs.14870. (2019)
Hideo Maeda, Kazumasa Murata, Nozomi Sakuma, Satomi Takei, Akihiko Yamazaki, Md. Rezaul Karim, Motoshige Kawata, Sakiko Hirose, Makiko Kawagishi-Kobayashi, Yojiro Taniguchi, Satoru Suzuki, Keisuke Sekino, Masahiro Ohshima, Hiroshi Kato, Hitoshi Yoshida, Yuzuru Tozawa. A rice gene that confers broad-spectrum resistance to b-triketone herbicides. Science 365(6451):393-396. doi: 10.1126/science.aax0379. (2019)
Sousuke Imamura, Yuhta Nomura, Tokiaki Takemura, Imran Pancha, Keiko Taki, Kazuki Toguchi, Yuzuru Tozawa, Kan Tanaka. The checkpoint kinase TOR (target of rapamycin) regulates expression of a nuclear-encoded chloroplast RelA-SpoT homolog (RSH) and modulates chloroplast ribosomal RNA synthesis in a unicellular red alga. Plant J 94(2):327-339. doi: 10.1111/tpj.13859. (2018)
Shunya Saito, Shin Hamamoto, Koko Moriya, Aiko Matsuura, Yoko Sato, Jun Muto, Hiroto Noguchi, Seiji Yamauchi, Yuzuru Tozawa, Minoru Ueda, Kenji Hashimoto, Philipp Köster, Qiuyan Dong, Katrin Held, Jörg Kudla, Toshihiko Utsumi, Nobuyuki Uozumi. N-myristoylation and S-acylation are common modifications of Ca2+ regulated Arabidopsis kinases and are required for activation of the SLAC1 anion channel. New Phytol. 218(4):1504-1521. doi: 10.1111/nph.15053. (2018)
西山教授              
Sakamoto, T., Takatani, N., Sonoike, K., Jimbo, H., Nishiyama, Y. and Omata, T. (2021) Dissection of the mechanisms of growth inhibition resulting from loss of the PII protein in the cyanobacterium Synechococcus elongatus PCC 7942. Plant Cell Physiol., in press.
Ishikawa, Y., Cassan, C., Kadeer, A., Yuasa, K., Sato, N., Sonoike, K., Kaneko, Y., Miyagi, A., Takahashi, H., Ishikawa, T., Yamaguchi, M., Nishiyama, Y., Hihara, Y., Gibon, Y. and Kawai-Yamada, M. (2021) The NAD kinase Slr0400 functions as a growth repressor in Synechocystis sp. PCC 6803. Plant Cell Physiol., in press.
Yuasa, K., Shikata, T., Ichikawa, T., Tamura, Y. and Nishiyama, Y. (2020) Nutrient deficiency stimulates the production of superoxide in the noxious red-tide-forming raphidophyte Chattonella antiqua. Harmful Algae, 99: 101938.
Jimbo, H., Takagi, K., Hirashima, T., Nishiyama, Y. and Wada, H. (2020) Long-chain saturated fatty acids, palmitic and stearic acids, enhance the repair of photosystem II. Intl. J. Mol. Sci., 21(20): 7509.
Shikata, T., Kitatsuji, S., Abe, K., Onitsuka, G, Matsubara, T., Nakayama, N., Yuasa, K., Nishiyama, Y., Mizuno, K., Masuda, T. and Nagai, K. (2020) Vertical distribution of a harmful red-tide dinoflagellate, Karenia mikimotoi, at the decline stage of blooms. J. Sea Res., 165: 101960.
Izuhara, T., Kaihatsu, I., Jimbo, H., Takaichi, S. and Nishiyama, Y. (2020) Elevated levels of specific carotenoids during acclimation to strong light protect the repair of photosystem II in Synechocystis sp. PCC 6803. Front. Plant Sci., 11: 1030.
Nishiyama, Y. (2020) Resilience under climate change. Nat. Plants, 6: 442-443.
Yuasa, K., Shikata, T., Kitatsuji, S., Yamasaki, Y. and Nishiyama, Y. (2020) Extracellular secretion of superoxide is regulated by photosynthetic electron transport in the noxious red-tide-forming raphidophyte Chattonella antiqua. J. Photochem. Photobiol. B: Biol., 205: 111839.
Jimbo, H., Izuhara, T., Hihara, Y., Hisabori, T. and Nishiyama, Y. (2019) Light-inducible expression of translation factor EF-Tu during acclimation to strong light enhances the repair of photosystem II. Proc. Natl. Acad. Sci. U.S.A., 116(42): 21268-21273.
Shikata, T., Takahashi, F., Nishide, H., Shigenobu, S., Kamei, Y., Sakamoto, S., Yuasa, K., Nishiyama, Y., Yamasaki, Y. and Uchiyama, I. (2019) RNA-seq analysis reveals genes related to photoreception, nutrient uptake, and toxicity in a noxious red-tide raphidophyte Chattonella antiqua. Front. Microbiol. 10: 1764.
Takahashi, H., Kusama, Y., Li, X., Takaichi, S. and Nishiyama, Y. (2019) Overexpression of orange carotenoid protein protects the repair of photosystem II under strong light in Synechocystis sp. PCC 6803. Plant Cell Physiol., 60(2): 365-375.
Jimbo, H., Yutthanasirikul, R., Nagano, T., Hisabori, T., Hihara, Y. and Nishiyama, Y. (2018) Oxidation of translation factor EF-Tu inhibits the repair of photosystem II. Plant Physiol., 176(4): 2691-2699.
Murata, N. and Nishiyama, Y. (2018) ATP is a driving force in the repair of photosystem II during photoinhibition. Plant Cell Environ., 41: 285-299.
Yuasa, K., Shikata, T., Kuwahara, Y. and Nishiyama, Y. (2018) Adverse effects of strong light and nitrogen deficiency cell viability, photosynthesis, and motility of the red-tide dinoflagellate Karenia mikimotoi. Phycologia, 57(5): 525-533.
Kujirai, J., Nanba, S., Kadowaki, T., Oka, Y., Nishiyama, Y., Hayashi, Y., Arai, M. and Hihara, Y. (2018) Interaction of the GntR-family transcription factor Sll1961 with thioredoxin in the cyanobacterium Synechocystis sp. PCC 6803. Sci. Rep., 8: 6666.
川合教授
Hachiya, T., Wakazaki, M., Sato, M., Toyooka, K., Miyagi, A., Kawai-Yamada, M., Sugiura, D., Nakagawa, T., Kiba, T., Gojon, A., Sakakibara H. (2021)Excessive ammonium assimilation by plastidic glutamine synthetase causes ammonium toxicity in Arabidopsis thaliana.Nature Communications 12, 4944
Tanaka, M., Ishikawa, Y., Suzuki, S., Ogawa, T., Taniguchi, Y.Y., Miyagi, A., Ishikawa, T., Yamaguchi, M., Nakajima-Munekage, Y., Kawai-Yamada, M. (2021)Change in expression levels of NAD kinase-encoding genes in Flaveria species.J Plant Physiol, in press.
Yokochi, Y., Yoshida, K., Hahn, F., Miyagi, A., Wakabayashi, K., Kawai-Yamada, M., Weber, A.P.M., Hisabori, T. (2021)Redox regulation of NADP-malate dehydrogenase is vital for land plants under fluctuating light environment.Proc Natl Acad Sci USA, 118(6), e2016903118.
Ishikawa, Y., Cassan, C., Kadeer, A., Yuasa, K., Sato, N., Sonoike, K., Kaneko, Y., Miyagi, A., Takahashi, H., Ishikawa, T., Yamaguchi, M., Nishiyama, Y., Hihara, Y., Gibon, Y., Kawai-Yamada, M. (2021)The NAD kinase Slr0400 functions as a growth repressor in Synechocystis sp. PCC 6803.Plant Cell Physiol., in press.
Kawai-Yamada, M., Miyagi, A., Sato, Y., Hosoi, Y., Hashida, S.-N., Ishikawa, T., Yamaguchi, M. (2021)Altered metabolism of chloroplastic NAD kinase–overexpressing Arabidopsis in response to magnesium sulfate supplementation.Plant Signal Behav, 16(1), 1844509.
Jing, B., Ishikawa, T., Soltis, N., Inada, N., Liang, Y., Murawska, G., Andeberhan, F., Pidatala, R., Yu, X., Baidoo, E., Kawai-Yamada, M., Loque, D., Kliebenstein, D.J., Dupree, P., Mortimer, J. (2021) The Arabidopsis thaliana nucleotide sugar transporter GONST2 is a functional homolog of GONST1. Plant Direct, in press.
Moore, W.M., Chan, C., Ishikawa, T., Rennie, E.A., Wipf, H.M.L., Benites, V., Kawai-Yamada, M., Mortimer, J.C., Scheller, H.V. (2021) Reprogramming sphingolipid glycosylation is required for endosymbiont persistence in Medicago truncatula. Current Biology, accepted
Miyagi, A., Saimaru, T.,,Harigai, N. Oono, Y.,Hase, Y., Kawai-Yamada, M. (2020) Metabolome analysis of rice leaves to obtain low-oxalate strain from ion beammutagenised population. Metabolomics, in press.
Nagano, M., Ueda, H., Fukao, Y., Kawai-Yamada, M., Hara-Nishimura, I. (2020) Generation of Arabidopsis lines with a red fluorescent marker for endoplasmic reticulum using a tail-anchored protein cytochrome b5-B. Plant Signaling & Behavior, in press
Nagahage, I.S.P., Sakamoto, S., Nagano, M., Ishikawa, T., Mitsuta, N., Kawai-Yamada, M.,Yamaguchi, M. (2020) An Arabidopsis NAC domain transcription factor, ATAF2, promotes age-dependent and dark-induced leaf senescence. Physiologia Plantarum, in press.
Ishikaea, Y., Kawai-Yamada, M., Hashida, S.N. (2020) Measurement of chloroplastic NAD kinase activity and whole tissue NAD kinase activity. Bio-protocol, 10(1) 3480.
Tanaka M, Ishikawa T, Tamura S, Saito Y, Kawai-Yamada M, Hihara Y. (2020) Quantitative and Qualitative Analyses of Triacylglycerol Production in the Wild-Type Cyanobacterium Synechocystis sp. PCC 6803 and the Strain Expressing AtfA from Acinetobacter baylyi ADP1. Plant Cell Physiol 61 (9) 1537–1547
Terai, Y., Ueno, H., Ogawa, T., Sawa, Y., Miyagi, A., Kawai-Yamada, M., Ishikawa, T., Maruta, T. (2020) Dehydroascorbate Reductases and Glutathione Set a Threshold for High-Light–Induced Ascorbate Accumulation. Plant Physiology, 183 (1), 112-122.
Takagi, D., Miyagi, A., Tazoe, Y., Suganami, M., Kawai-Yamada, M., Ueda, A., Suzuki, Y., Noguchi, K., Hirotsu, N., Makino, A. (2020) Phosphorus toxicity disrupts Rubisco activation and reactive oxygen species defence systems by phytic acid accumulation in leaves Plant, Cell & Environment, in press.
Sato, M., Nagano, M., Jin, S., Miyagi, A., Yamaguchi, M., Kawai-Yamada, M., Ishikawa, T. (2020) Plant-unique cis/trans isomerism of long-chain base unsaturation is selectively required for aluminum tolerance resulting from glucosylceramide-dependent plasma membrane fluidity. Plants, 91(1)19.
Ishikawa, Y., Kawai-Yamada, M. (2019) Physiological significance of NAD kinases in cyanobacteria. Front. Plant Sci., 27:10:847.
Hashida, S.N., Kaai-Yamada, M. (2019) Inter-organelle NAD metabolism underpinning light responsive NADP dynamics in plants. Front. Plant Sci., 26;10:960.
Hasi, R.Y. Miyagi, M., Morito, K., Ishikawa, T., Kawai-Yamada,M., Imai, H., Fukuta, T., Kogure, K., Kanemaru, K., Hayashi, J., Kawakami, R., Tanaka T. (2019) Glycosylinositol phosphoceramide-specific phospholipase D activity catalyzes transphosphatidylation. in press.
Jiang, Z., Watanabe, C.K.A., Miyagi, A., Kawai-Yamada, M., Terashima, I., Noguchi, K. (2019) he mitochondrial alternative oxidase supports redox balance of the photosynthetic electron transport, primary metabolite balance and growth at high light. Int. J. Mol. Sci., 20(12): 3067.
Adachi, S., Tanaka, Y., Miyagi, A., Kashima, M.,Tezuka, A., Toya, Y., Kobayashi, S.,Ohkubo, S., Shimizu, H., Kawai-Yamada, M., Sage, R.F., Nagano, A.J., Yamori, W. (2019)High-yielding rice Takanari has superior photosynthetic response to a commercial rice Koshihikari under fluctuating light. Journal of Experimental Botany, in press.
Ishikawa, Y., Miyagi, A., Ishikawa, T., Nagano, M., Yamaguchi, M., Hihara, Y., Kaneko, Y., Kawai-Yamada, M. (2019) One of the NAD kinases, sll1415, is required for the glucose metabolism of Synechocystis sp. PCC 6803. The Plant Journal, in press.
Miyagi, A., Noguchi, K., Tokida, T., Usui, Y., Nakamura, H., Sakai, H., Hasegawa, T., Kawai-Yamada, M. (2019) Oxalate contents in leaves of two rice cultivars grown at a free-air CO2 enrichment (FACE) site. Plant Production Science, 22, 407–411.
Parveen, M., Miyagi, A., Kawai-Yamada, M., Rashid, M.H., Asaeda, T. (2019) Metabolic and biochemical responses of Potamogeton anguillanus Koidz. (Potamogetonaceae) to low oxygen conditions J. Plant Physiol., 232, 171-179.
Nagano, M., Kakuta, C., Fukao, Y., Fujiwara, M., Uchimiya, H., Kawai-Yamada, M. (2019) Arabidopsis Bax inhibitor-1 interacts with enzymes related to very-long-chain fatty acid synthesis. J. Plant Res., 132, 131-143.
Hashida, S., Miyagi, A., Nishiyama, M., Yoshida, K., Hisabori, T., Kawai-Yamada, M. (2018) Ferredoxin/thioredoxin system plays an important role in the chloroplastic NADP status of Arabidopsis. The Plant Journal, 95, 947-960.
Kodama, Y., Kawahara, A., Miyagi, A., Ishikawa, T., Kawai-Yamada, M., Kaneko, Y., Takimura, Y., Hihara, Y. (2018) Effects of inactivation of the cyAbrB2 transcription factor together with glycogen synthesis on cellular metabolism and free fatty acid production in the cyanobacterium Synechocystis sp. PCC 6803. Biotechnology and Bioengineering.115, 2974-2985.
Sechet, J., Htwe, S., Urbanowicz, B., Agyeman, A., Feng, W., Ishikawa, T., Dinneny, J., Colomes, M., Satish Kumar, K., Kawai-Yamada, M., O'Neill, M., Mortimer, J. (2018) Suppressing Arabidopsis GGLT1 affects growth by reducing the L-galactose content and borate cross-linking of rhamnogalacturonan II. Plant J. 96, 1036-1050.
Ishikawa, T., Fang, L., Rennie, E.A., Sechet, J., Yan, J., Jing, B., Moore, W., Markham, J., Cahoon, E.B., Scheller, H.V., Kawai-Yamada, M., Mortimer, J.C. (2018)GLUCOSAMINE INOSITOLPHOSPHORYLCERAMIDE TRANSFERASE1 (GINT1) Is a GlcNAc-Containing Glycosylinositol Phosphorylceramide Glycosyltransferase. Plant Physiology, 177, 938-952.
Nagahage, I.S.P., Sakamoto, S., Nagano, M., Ishikawa, T., Kawai-Yamada, M., Mitsuda, N., Yamaguchi, M. (2018) An NAC domain transcription factor ATAF2 acts as transcriptional activator or repressor dependent on promoter context. Plant Biotechnology, 35, 285-289.
Imamura, T., Obata, C., Yoneyama, K., Ichikawa, M., Ikura, A., Mutsuro-Aoki, H., Ishikawa T., Kawai-Yamada, M., Sasaki, T., Kusano, H., Shimada, H. (2018) DSH5, a dihydrosphingosine C4 hydroxylase gene family member, shows spatially restricted expression in rice and is lethal when expressed ectopically. Genes and Genetic Systems, 93, 135-142.
Miyagi, A., Kitano, S., Oono, Y., Hase, Y., Narumi, I., Yamaguchi, M., Uchimiya, H., Kawai-Yamada, M. (2018) Evaluation of metabolic changes in oxalate-rich plant Rumex obtusifolius L. caused by ion beam irradiation. Plant Physiology and Biochemistry, 122, 40-45.
Noguchi, K., Tsunoda, T., Miyagi, A., Kawai-Yamada, M., Sugiura, D., Miyazawa, S., Tokida, T., Usui, Y., Nakamura, H., Sakai, H., Hasegawa, T. (2018) Effects of elevated atmospheric CO2 on respiratory rates in mature leaves of two rice cultivars grown at a free-air CO2 enrichment site and analyses of the underlying mechanisms. Plant, Cell & Physiology. 59, 637-649.
小竹教授              
Lopez-Hernandez F., Tryfona T., Rizza A., Yu X., Harris M.O., Webb A.A.R., Dr. Kotake T., and Dupree P. (2020) Calcium binding by arabinogalactan polysaccharides is important for normal plant development. Plant Cell in press.
Wakabayashi K., Soga K., Hoson T., Kotake T., Yamazaki T., Higashibata A.,Ishioka N., Shimazu T., Kamada M. (2020) Microgravity affects the level of matrix polysaccharide 1,3:1,4-β-glucans in cell walls of rice shoots by increasing the expression level of a gene involved in their breakdown. Astrobiology in press.
Yoshimi Y., Hara K., Yoshimura M., Tanaka N., Higaki T., Tsumuraya Y., Kotake T. (2020) Expression of a fungal exo-β-1,3-galactanase in Arabidopsis reveals a role of type II arabinogalactans in the regulation of cell shape. J. Exp. Bot. 71, 5414-5424.
Tsumuraya Y., Ozeki E., Ooki Y., Yoshimi Y., Hashizume K., Kotake T. (2019) Properties of arabinogalactan-proteins in European pear (Pyrus communis L.) fruits. Carbohydr. Res. 485, 107816.
Fujita K., Sakamoto A., Kaneko S., Kotake T., Tsumuraya Y., Kitahara K. (2019) Degradative enzymes for type II arabinogalactan side chains in Bifidobacterium longum subsp. Longum. Appl. Environ. Microbiol. 103,1299-1310.
Soga K., Yamazaki C., Kamada M., Tanigawa N., Kasahara H., Yano S., Kojo K.H., Kutsuna N., Kato T., Hashimoto T., Kotake T., Wakabayashi K., Hoson T. (2018) Modification of growth anisotropy and cortical microtubule dynamics in Arabidopsis hypocotyls grown under microgravity conditions in space. Physiol. Plant. 162, 135-144.
Sato K., Hara K., Yoshimi K., Kitazawa K., Ito H., Tsumuraya Y., Kotake T. (2018) Yariv reactivity of type II arabinogalactan from larch wood. Carbohydr. Res. 467, 8-13.
Yu L., Lyczakowski J.J., Pereira C.S., Kotake T., Yu X., Li A., Møgelsvang S., Skaf M.S., Dupree P. (2018) The patterned structure of galactoglucomannan synthesized by CSLA2 and MAGT1 suggests it may bind to cellulose. Plant Physiol. 178, 1011-1026.
日原教授
Ishikawa, Y., Cassan, C., Kadeer, A., Yuasa, K., Sato, N., Sonoike, K., Kaneko, Y., Miyagi, A., Takahashi, H., Ishikawa, T., Yamaguchi, M., Nishiyama, Y., Hihara, Y., Gibon, Y. and Kawai-Yamada, M. (2021) The NAD kinase Slr0400 functions as a growth repressor in Synechocystis sp. PCC 6803. Plant Cell Physiol., in press.
Takashima K., Nagao S., Kizawa A., Suzuki T., Dohmae N. and Hihara Y. (2020)The role of transcriptional repressor activity of LexA in salt-stress responses of the cyanobacterium Synechocystis sp. PCC 6803Scientific Reports in press
Tanaka M, Ishikawa T, Tamura S, Saito Y, Kawai-Yamada M, Hihara Y. (2020) Quantitative and Qualitative Analyses of Triacylglycerol Production in the Wild-Type Cyanobacterium Synechocystis sp. PCC 6803 and the Strain Expressing AtfA from Acinetobacter baylyi ADP1. Plant Cell Physiol 61 (9) 1537–1547
Jimbo H., Izuhara T., Hihara Y., Hisabori T. and Nishiyama Y. (2019) Light-inducible expression of translation factor EF-Tu during acclimation to strong light enhances the repair of photosystem II. Proc Natl Acad Sci U S A. 116: 21268-21273
Higo A., Nishiyama E., Nakamura K., Hihara Y. and Ehira S. (2019) cyAbrB Transcriptional regulators as safety devices to inhibit heterocyst differentiation in Anabaena sp. Strain PCC 7120. J Bacteriol 201: pii: e00244-19
Riediger M., Kadowaki T., Nagayama R., Georg J., Hihara Y. and Hess W.R. (2019) Biocomputational analyses and experimental validation identify the complex regulon controlled by the redox-responsive transcription factor RpaB. iScience 15: 316-331
Ishikawa Y., Miyagi A., Ishikawa T., Nagano M., Yamaguchi M., Hihara Y., Kaneko Y. and Kawai-Yamada M. (2019) One of the NAD kinases, sll1415, is required for the glucose metabolism of Synechocystis sp. PCC 6803. Plant Journal 98: 654-666
Kodama Y., Kawahara A., Miyagi A., Ishikawa T., Kawai-Yamada M., Kaneko Y., Takimura Y. and Hihara Y. (2018) Effects of inactivation of the cyAbrB2 transcription factor together with glycogen synthesis on cellular metabolism and free fatty acid production in the cyanobacterium Synechocystis sp. PCC 6803. Biotechnology and Bioengineering 115: 2974-2985
Kujirai J., Nanba S., Kadowaki T., Oka Y., Nishiyama Y., Hayashi Y., Arai M. and Hihara Y. (2018) Interaction of the GntR-family transcription factor Sll1961 with thioredoxin in the cyanobacterium Synechocystis sp. PCC 6803. Scientfic Reports 8: 6666
Riediger M., Hihara Y. and Hess W.R. (2018) From cyanobacteria and algae to land plants: The RpaB/Ycf27 regulatory network in transition. Perspectives in Phycology 5: 13-25
Jimbo H., Yutthanasirikul R., Nagano T., Hisabori T., Hihara Y. and Nishiyama Y. (2018) Oxidation of translation factor EF-Tu inhibits the repair of photosystem II. Plant Physiology 176: 2691-2699
竹澤教授                
Shinozawa A, Otake R, Takezawa D, Umezawa T, Komatsu K, Tanaka T, Amagai A, Ishikawa S, Hara Y, Kamisugi Y, Cuming AC, Hori K, Ohta H, Takahashi F, Shinozaki K, Hayashi T, Taji, Sakata Y (2019) SnRK2 protein kinases represent an ancient system in plants for adaptation to a terrestrial environment. Commun Biol. 2, 30
Jahan A, Komatsu K, Wakida-Sekiya M, Hiraide M, Tanaka K, Ohtake R, Umezawa T, Toriyama T, Shinozawa A, Yotsui I, Sakata Y and Takezawa D (2019) Archetypal roles of the PYR/PYL/RCAR-like receptor in drought and sugar responses in liverworts. Plant Physiol.179: 317-328
Amagai A, Honda Y, Ishikawa S, Hara Y, Takezawa D, Sakata Y, Shinozaki K, Umezawa T (2018) Phosphoproteomic profiling reveals ABA-responsive phosphosignaling pathways in Physcomitrella patens. Plant J. 94: 699-708
山口准教授  
Tanaka, M., Ishikawa, Y., Suzuki, S., Ogawa, T., Taniguchi, Y.Y., Miyagi, A., Ishikawa, T., Yamaguchi, M., Nakajima-Munekage, Y., Kawai-Yamada, M. (2021)Change in expression levels of NAD kinase-encoding genes in Flaveria species.J Plant Physiol, in press.
Ishikawa, Y., Cassan, C., Kadeer, A., Yuasa, K., Sato, N., Sonoike, K., Kaneko, Y., Miyagi, A., Takahashi, H., Ishikawa, T., Yamaguchi, M., Nishiyama, Y., Hihara, Y., Gibon, Y., Kawai-Yamada, M. (2021)The NAD kinase Slr0400 functions as a growth repressor in Synechocystis sp. PCC 6803.Plant Cell Physiol., in press.
Kawai-Yamada, M., Miyagi, A., Sato, Y., Hosoi, Y., Hashida, S.-N., Ishikawa, T., Yamaguchi, M. (2021)Altered metabolism of chloroplastic NAD kinase–overexpressing Arabidopsis in response to magnesium sulfate supplementation.Plant Signal Behav, 16(1), 1844509.
Nagahage ISP, Sakamoto S, Nagano M, Ishikawa T, Kawai-Yamada M, Mitsuda N, Yamaguchi M* (2020) An Arabidopsis NAC domain transcription factor, ATAF2, promotes age-dependent and dark-induced leaf senescence. Physiol. Plant. in press
Sato M, Nagano M, Jin S, Miyagi A, Yamaguchi M, Kawai-Yamada M, Ishikawa T (2020) Plant -unigue cis/trans isomerism of long-chain base unsaturation is selectively required for Alminum tolerance resulting from glucosylceramide-dependent plasma membrane fluidity. Plants 9: 19  
Wang S, Yamaguchi M, Grienenberger E, Martone PT, Samuels AL, Mansfield S (2020) The Class II KNOX genes KNAT3 and KNAT7 work coorperatively to influence secondary cell wall deposition and provide mechanical support to Arabidopsis stem. Plant J. 101: 293–309
Tamura T, Endo H, Suzuki A, Sato Y, Kato K, Ontani M, Yamaguchi M*, Demura T* (2019) Affinity-based high-resolution analysis of DNA binding by VASCULAR-RELATED NAC-DOMAIN7 via fluorescence correlation spectorscopy . Plant J. 100: 298–313
Ishikawa Y, Miyagi A, Ishikawa T, Nagano M, Yamaguchi M, Hihara Y, Kaneko Y, Kawai-Yamada M (2019) One of the NAD kinases, sll1415, is required for the glucose metabolism of Synechocystis sp. PCC 6803. Plant J. 98: 654–666
Saelim L, Akiyoshi N, Tan TT, Ihara A, Yamaguchi M, Hirano K, Matsuoka M, Demura T, Ohtani M (2019) Arabidopsis Group IIId ERF proteins positively regulate primary cell wall-type CESA genes. J. Plant Res. 132: 117–129
Nagahage ISP, Sakamoto S, Nagano M, Ishikawa T, Kawai-Yamada M, Mitsuda N, Yamaguchi M* (2018) An NAC domain transcription factor ATAF2 acts as transcriptional activator or repressor dependent on promoter context. Plant Biotechnol. 35: 285-289
Okada T, Yamane S, Yamaguchi M, Kato K, Shinmyo A, Tsunemitsu Y, Iwasaki K, Ueno D, Demura T (2018) Characterizationo of rice KT/HAK/KUP potassium transporters and K+ uptake by HAK1 from Oryza sativa. Plant Biotechnol. 35: 101-111
Tan TT, Endo H, Sano R, Kurata T, Yamaguchi M, Ohtani M, Demura T (2018) Transcription factors VND1-VND3 contribute to cotyledon xylem vessel formation. Plant Physiol. 176: 773-789
Miyagi A, Kitano S, Oono Y, Hase Y, Narumi I, Yamaguchi M, Uchimiya H, Kawai-Yamada M (2018) Evaluation of metabolic changes in oxalate-rich plant Rumex obtusifolius L. caused by ion beam irradiation. Plant Physiol. Biochem. 122: 40-45
豊田准教授  
Uemura T, Wang J, Aratani Y, Gilroy S, Toyota M (2020) Wide-field, real-time imaging of local and systemic wound signals in Arabidopsis. J Vis Exp in press.
Abe Y, Meguriya K, Matsuzaki T, Sugiyama T, Yoshikawa HY, Morita MT, Toyota M (2020) Micromanipulation of amyloplasts with optical tweezers in Arabidopsis stems. Plant Biotechnol in press.
H Suda, H Mano, M Toyota, K Fukushima, T Mimura, I Tsutsui, R Hedrich, Y Tamada, M Hasebe (2020)Calcium dynamics during trap closure visualized in transgenic Venus flytrap. Nature Plants 6, 1219–1224
R Hilleary, J Paez-Valencia, C Vens, M Toyota, M Palmgren, S Gilroy (2020)Tonoplast-localized Ca2+ pumps regulate Ca2+ signals during pattern-triggered immunity in Arabidopsis thaliana.Proceedings of the National Academy of Sciences 117 (31), 18849-18857
Hagihara T, Toyota M (2020) Mechanical Signaling in the Sensitive Plant Mimosa pudica L. Plants 9:587.
Kimura S, Hunter K, Vaahtera L, Tran HC, Citterico M, Vaattovaara A, Rokka A, Stolze SC, Harzen A, Meissner L, Wilkens MMT, Hamann T, Toyota M, Nakagami H, Wrzaczek M (2020)CRK2 and C-terminal Phosphorylation of NADPH Oxidase RBOHD Regulate Reactive Oxygen Species Production in Arabidopsis. Plant Cell in press
Hunter K, Kimura S, Rokka A, Tran HC, Toyota M, Kukkonen JP, Wrzaczek M (2019)CRK2 Enhances Salt Tolerance by Regulating Callose Deposition in Connection with PLDalpha1. Plant Physiol 180: 2004-2021
Toyota M, Spencer D, Sawai-Toyota S, Wang J, Zhang T, Koo A, Howe G, Gilroy S (2018)Glutamate triggers long-distance, calcium-based plant defense signaling. Science: 361,1112-1115.
Toyota M, Furuichi T, Iida H (2018)Molecular Mechanisms of Mechanosensing and Mechanotransduction. Plant Biomechanics:375-397.
長谷川准教授
Murohashi F, Uchida H, Hasegawa Y, Evaluation of photosynthetic activity by bioelectric potential for optimizing wavelength ratio of plant cultivation light, International Journal of Biosensors & Bioelectronics, Vol.4, No.6, pp. 281-287 (2018).
小杉恵太,長谷川有貴,内田秀和, 無機半導体pn接合を用いたアレイ化電気化学センサの研究, 電気学会論文誌E, Vol.138,No.5, pp. 204-207 (2018).
石田亮太,内田秀和,長谷川有貴,庵原啓司,小泉大輔, 植物生体電位を用いた収穫後果実の熟度評価, 電気学会論文誌E, Vol.138,No.9, pp. 423-429 (2018).
池田准教授
Ikeda, M., Mitsuda, N., Ishizuka, T., Satoh M., and Ohme-Takagi, M. (2020). The CIB1 Transcription Factor Regulates light- and Heat-inducible Cell Elongation via a Two-step HLH/bHLH System. Journal of Experimental Botany. DOI: 10.1093/jxb/eraa567
Ikeda, M., Takahashi, M., Fujiwara, S., Mitsuda, N., and Ohme-Takagi, M. (2020). Improving the Efficiency of Adventitious Shoot Induction and Somatic Embryogenesis via Modification of WUSCHEL and LEAFY COTYLEDON 1. Plants (basal) 9(11):1434. doi: 10.3390/plants9111434.
Sanagi, M., Lu, Y., Aoyama, S., Morita, Y., Mitsuda, N., Ikeda, M., Ohme-Takagi, M., Sato, T., and Yamaguchi, J. (2018). Sugar-responsive transcription factor bZIP3 affects leaf shape in Arabidopsis plants. Plant Biotechnol (Tokyo) 35, 167-170.
Sato H, Takasaki H, Takahashi F, Suzuki T, Iuchi S, Mitsuda N, Ohme-Takagi M, Ikeda M, Seo M, Yamaguchi-Shinozaki K, Shinozaki K*. (2018) Arabidopsis thaliana NGATHA1 transcription factor induces ABA biosynthesis by activating NCED3gene during dehydration stress. Proc Natl Acad Sci USA. 115:E11178-E11187.
石川准教授  
Tanaka, M., Ishikawa, Y., Suzuki, S., Ogawa, T., Taniguchi, Y.Y., Miyagi, A., Ishikawa, T., Yamaguchi, M., Nakajima-Munekage, Y., Kawai-Yamada, M. (2021)Change in expression levels of NAD kinase-encoding genes in Flaveria species.J Plant Physiol, in press.
Ishikawa, Y., Cassan, C., Kadeer, A., Yuasa, K., Sato, N., Sonoike, K., Kaneko, Y., Miyagi, A., Takahashi, H., Ishikawa, T., Yamaguchi, M., Nishiyama, Y., Hihara, Y., Gibon, Y., Kawai-Yamada, M. (2021)The NAD kinase Slr0400 functions as a growth repressor in Synechocystis sp. PCC 6803.Plant Cell Physiol., in press.
Kawai-Yamada, M., Miyagi, A., Sato, Y., Hosoi, Y., Hashida, S.-N., Ishikawa, T., Yamaguchi, M. (2021)Altered metabolism of chloroplastic NAD kinase–overexpressing Arabidopsis in response to magnesium sulfate supplementation.Plant Signal Behav, 16(1), 1844509.
Steshin M, Ishikawa T (2021). Liquid chromatography-tandem mass spectrometry with a new separation mode for rapid profiling of the Z/E isomers of plant glucosylceramides. J. Chromatogr. B, 122807.
Jing, B., Ishikawa, T., Soltis, N., Inada, N., Liang, Y., Murawska, G., Andeberhan, F., Pidatala, R., Yu, X., Baidoo, E., Kawai-Yamada, M., Loque, D., Kliebenstein, D.J., Dupree, P., Mortimer, J. (2021) The Arabidopsis thaliana nucleotide sugar transporter GONST2 is a functional homolog of GONST1. Plant Direct, in press.
Moore, W.M., Chan, C., Ishikawa, T., Rennie, E.A., Wipf, H.M.L., Benites, V., Kawai-Yamada, M., Mortimer, J.C., Scheller, H.V. (2021) Reprogramming sphingolipid glycosylation is required for endosymbiont persistence in Medicago truncatula. Current Biology, accepted
Tanaka M, Ishikawa T, Tamura S, Saito Y, Kawai-Yamada M, Hihara Y. (2020) Quantitative and Qualitative Analyses of Triacylglycerol Production in the Wild-Type Cyanobacterium Synechocystis sp. PCC 6803 and the Strain Expressing AtfA from Acinetobacter baylyi ADP1. Plant Cell Physiol 61 (9) 1537–1547
Sato, M., Nagano, M., Jin, S., Miyagi, A., Yamaguchi, M., Kawai-Yamada, M., Ishikawa, T. (2020) Plant-unique cis/trans isomerism of long-chain base unsaturation is selectively required for aluminum tolerance resulting from glucosylceramide-dependent plasma membrane fluidity. Plants, 91(1)19.
Nagahage ISP, Sakamoto S, Nagano M, Ishikawa T, Kawai-Yamada M, Mitsuda N, Yamaguchi M* (2020) An Arabidopsis NAC domain transcription factor, ATAF2, promotes age-dependent and dark-induced leaf senescence. Physiol. Plant. in press
Ishikawa Y, Miyagi A, Ishikawa T, Nagano M, Yamaguchi M, Hihara Y, Kaneko Y, Kawai-Yamada M (2019) One of the NAD kinases, sll1415, is required for the glucose metabolism of Synechocystis sp. PCC 6803. Plant J. 98: 654–666
Hasi, R.Y. Miyagi, M., Morito, K., Ishikawa, T., Kawai-Yamada,M., Imai, H., Fukuta, T., Kogure, K., Kanemaru, K., Hayashi, J., Kawakami, R., Tanaka T. (2019) Glycosylinositol phosphoceramide-specific phospholipase D activity catalyzes transphosphatidylation. in press.
Kodama, Y., Kawahara, A., Miyagi, A., Ishikawa, T., Kawai-Yamada, M., Kaneko, Y., Takimura, Y., Hihara, Y. (2018) Effects of inactivation of the cyAbrB2 transcription factor together with glycogen synthesis on cellular metabolism and free fatty acid production in the cyanobacterium Synechocystis sp. PCC 6803. Biotechnology and Bioengineering.115, 2974-2985.
Sechet, J., Htwe, S., Urbanowicz, B., Agyeman, A., Feng, W., Ishikawa, T., Dinneny, J., Colomes, M., Satish Kumar, K., Kawai-Yamada, M., O'Neill, M., Mortimer, J. (2018) Suppressing Arabidopsis GGLT1 affects growth by reducing the L-galactose content and borate cross-linking of rhamnogalacturonan II. Plant J. 96, 1036-1050.
Ishikawa, T., Fang, L., Rennie, E.A., Sechet, J., Yan, J., Jing, B., Moore, W., Markham, J., Cahoon, E.B., Scheller, H.V., Kawai-Yamada, M., Mortimer, J.C. (2018)GLUCOSAMINE INOSITOLPHOSPHORYLCERAMIDE TRANSFERASE1 (GINT1) Is a GlcNAc-Containing Glycosylinositol Phosphorylceramide Glycosyltransferase. Plant Physiology, 177, 938-952.
Nagahage, I.S.P., Sakamoto, S., Nagano, M., Ishikawa, T., Kawai-Yamada, M., Mitsuda, N., Yamaguchi, M. (2018)An NAC domain transcription factor ATAF2 acts as transcriptional activator or repressor dependent on promoter context. Plant Biotechnology, 35, 285-289.
Imamura, T., Obata, C., Yoneyama, K., Ichikawa, M., Ikura, A., Mutsuro-Aoki, H., Ishikawa T., Kawai-Yamada, M., Sasaki, T., Kusano, H., Shimada, H. (2018) DSH5, a dihydrosphingosine C4 hydroxylase gene family member, shows spatially restricted expression in rice and is lethal when expressed ectopically. Genes and Genetic Systems, 93, 135-142.
是枝講師
"Matsuoka T., Onozawa A., Sonoike K., and Kore-eda S. (2018)Crassulacean acid metabolism induction in Mesembryanthemum crystallinum can be estimated by non-photochemical quenching upon actinic illumination during the dark period.Plant and Cell Physiology 59 1966-1975 "
宮城助教  
Hachiya, T., Wakazaki, M., Sato, M., Toyooka, K., Miyagi, A., Kawai-Yamada, M., Sugiura, D., Nakagawa, T., Kiba, T., Gojon, A., Sakakibara H. (2021)Excessive ammonium assimilation by plastidic glutamine synthetase causes ammonium toxicity in Arabidopsis thaliana.Nature Communications 12, 4944
Tanaka, M., Ishikawa, Y., Suzuki, S., Ogawa, T., Taniguchi, Y.Y., Miyagi, A., Ishikawa, T., Yamaguchi, M., Nakajima-Munekage, Y., Kawai-Yamada, M. (2021)Change in expression levels of NAD kinase-encoding genes in Flaveria species.J Plant Physiol, in press.
Yokochi, Y., Yoshida, K., Hahn, F., Miyagi, A., Wakabayashi, K., Kawai-Yamada, M., Weber, A.P.M., Hisabori, T. (2021)Redox regulation of NADP-malate dehydrogenase is vital for land plants under fluctuating light environment.Proc Natl Acad Sci USA, 118(6), e2016903118.
Ishikawa, Y., Cassan, C., Kadeer, A., Yuasa, K., Sato, N., Sonoike, K., Kaneko, Y., Miyagi, A., Takahashi, H., Ishikawa, T., Yamaguchi, M., Nishiyama, Y., Hihara, Y., Gibon, Y., Kawai-Yamada, M. (2021)The NAD kinase Slr0400 functions as a growth repressor in Synechocystis sp. PCC 6803.Plant Cell Physiol., in press.
Kawai-Yamada, M., Miyagi, A., Sato, Y., Hosoi, Y., Hashida, S.-N., Ishikawa, T., Yamaguchi, M. (2021)Altered metabolism of chloroplastic NAD kinase–overexpressing Arabidopsis in response to magnesium sulfate supplementation.Plant Signal Behav, 16(1), 1844509.
A. Miyagi, T. Saimaru, N. Harigai, Y. Oono, Y. Hase, M. Kawai-Yamada. (2020).Metabolome analysis of rice leaves to obtain low-oxalate strain from ion beam-mutagenised population.Metabolomics, 16(9), Article 94.
Terai, Y., Ueno, H., Ogawa, T., Sawa, Y., Miyagi, A., Kawai-Yamada, M., Ishikawa, T., Maruta, T. (2020) Dehydroascorbate Reductases and Glutathione Set a Threshold for High-Light–Induced Ascorbate Accumulation. Plant Physiology, 183 (1), 112-122.
Takagi, D., Miyagi, A., Tazoe, Y., Suganami, M., Kawai-Yamada, M., Ueda, A., Suzuki, Y., Noguchi, K., Hirotsu, N., Makino, A. (2020) Phosphorus toxicity disrupts Rubisco activation and reactive oxygen species defence systems by phytic acid accumulation in leaves Plant, Cell & Environment, in press.
Sato, M., Nagano, M., Jin, S., Miyagi, A., Yamaguchi, M., Kawai-Yamada, M., Ishikawa, T. (2020) Plant-unique cis/trans isomerism of long-chain base unsaturation is selectively required for aluminum tolerance resulting from glucosylceramide-dependent plasma membrane fluidity. Plants, 91(1)19.
Jiang, Z., Watanabe, C.K.A., Miyagi, A., Kawai-Yamada, M., Terashima, I., Noguchi, K. (2019) he mitochondrial alternative oxidase supports redox balance of the photosynthetic electron transport, primary metabolite balance and growth at high light. Int. J. Mol. Sci., 20(12): 3067.
Adachi, S., Tanaka, Y., Miyagi, A., Kashima, M.,Tezuka, A., Toya, Y., Kobayashi, S.,Ohkubo, S., Shimizu, H., Kawai-Yamada, M., Sage, R.F., Nagano, A.J., Yamori, W. (2019)High-yielding rice Takanari has superior photosynthetic response to a commercial rice Koshihikari under fluctuating light. Journal of Experimental Botany, in press.
Ishikawa, Y., Miyagi, A., Ishikawa, T., Nagano, M., Yamaguchi, M., Hihara, Y., Kaneko, Y., Kawai-Yamada, M. (2019) One of the NAD kinases, sll1415, is required for the glucose metabolism of Synechocystis sp. PCC 6803. The Plant Journal, in press.
Miyagi, A., Noguchi, K., Tokida, T., Usui, Y., Nakamura, H., Sakai, H., Hasegawa, T., Kawai-Yamada, M. (2019) Oxalate contents in leaves of two rice cultivars grown at a free-air CO2 enrichment (FACE) site. Plant Production Science, 22, 407–411.
Parveen, M., Miyagi, A., Kawai-Yamada, M., Rashid, M.H., Asaeda, T. (2019) Metabolic and biochemical responses of Potamogeton anguillanus Koidz. (Potamogetonaceae) to low oxygen conditions J. Plant Physiol., 232, 171-179.
Hashida, S., Miyagi, A., Nishiyama, M., Yoshida, K., Hisabori, T., Kawai-Yamada, M. (2018) Ferredoxin/thioredoxin system plays an important role in the chloroplastic NADP status of Arabidopsis. The Plant Journal, 95, 947-960.
Kodama, Y., Kawahara, A., Miyagi, A., Ishikawa, T., Kawai-Yamada, M., Kaneko, Y., Takimura, Y., Hihara, Y. (2018) Effects of inactivation of the cyAbrB2 transcription factor together with glycogen synthesis on cellular metabolism and free fatty acid production in the cyanobacterium Synechocystis sp. PCC 6803. Biotechnology and Bioengineering.115, 2974-2985.
Miyagi, A., Kitano, S., Oono, Y., Hase, Y., Narumi, I., Yamaguchi, M., Uchimiya, H., Kawai-Yamada, M. (2018) Evaluation of metabolic changes in oxalate-rich plant Rumex obtusifolius L. caused by ion beam irradiation. Plant Physiology and Biochemistry, 122, 40-45.
Noguchi, K., Tsunoda, T., Miyagi, A., Kawai-Yamada, M., Sugiura, D., Miyazawa, S., Tokida, T., Usui, Y., Nakamura, H., Sakai, H., Hasegawa, T. (2018) Effects of elevated atmospheric CO2 on respiratory rates in mature leaves of two rice cultivars grown at a free-air CO2 enrichment site and analyses of the underlying mechanisms. Plant, Cell & Physiology. 59, 637-649.
高橋拓子助教
Ishikawa, Y., Cassan, C., Kadeer, A., Yuasa, K., Sato, N., Sonoike, K., Kaneko, Y., Miyagi, A., Takahashi, H., Ishikawa, T., Yamaguchi, M., Nishiyama, Y., Hihara, Y., Gibon, Y. and Kawai-Yamada, M. (2021) The NAD kinase Slr0400 functions as a growth repressor in Synechocystis sp. PCC 6803. Plant Cell Physiol., in press.
Takahashi H, Kusama Y, Xinxiang Li, Takaichi S, and Nishiyama Y (2019) Overexpression of orange carotenoid protein protects the repair of photosystem II under strong light in Synechocystis sp. PCC 6803. Plant Cell Physiol. Vol. 60, 367-375
Caijuan Wang, Takahashi H and Shikanai T PROTON GRADIENT REGULATION 5 contributes to ferredoxin-dependent cyclic phosphorylation in ruptured chloroplasts. BBA Bioenergetics. Vol. 1859, (2018) 1173-1179
Ozawa S, Till Bald, Onishi T, Huidan Xue, Matsumura T, Kubo R, Takahashi H, Michael Hippler, and Takahashi Y (2018) Configuration of ten light-harvesting chlorophyll a/b complex I subunits in photosystem I supercomplex in the green alga Chlamydomonas reinhardtii. Plant Physiol. Vol. 178, 583-595
高橋大輔助教
Li B, Takahashi D, Kawamura Y, Uemura M (2019) Plasma membrane proteome analyses of Arabidopsis thaliana suspension-cultured cells during cold acclimation or ABA treatment: relationship with freezing tolerance and growth phase. J.Proteomics 211:103528.
Takahashi D, Gorka M, Erban A, Graf A, Kopka J, Zuther E, Hincha DK (2019) Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Sci. Rep. 9:2289.
Miki Y*, Takahashi D*, Kawamura Y, Uemura M (2018) Temporal proteomics of Arabidopsis plasma membrane during cold- and de-acclimation. J. Proteomics 197:71-81 (*co-first author).
Ceballos-Laita L, Gutierrez-Carbonell E, Takahashi D, Abadía A, Uemura M, Abadía J, López-Millán AF (2017) Data on xylem sap proteins from Mn- and Fe-deficient tomato plants obtained using shotgun proteomics. Data Brief 17: 512-516.
Willick IR, Takahashi D, Fowler DB, Uemura M, Tanino KK (2018). Tissue-specific changes in apoplastic proteins and cell wall structure during cold acclimation of winter wheat crowns. J. Exp. Bot. 69: 1221-1234.
Takahashi D, Uemura M, Kawamura Y (2018) Freezing tolerance of plant cells: from the aspect of plasma membrane and microdomain. In: Adaptations to Cold and Desiccation, Eds. Uemura M, Inoue M, Sakurai M. (Springer Science+Business Media), 61-79 (ISBN- 978-981-13-1244-1).
高崎助教
Maruyama K, Urano K, Kusano M, Sakurai T, Takasaki H, Kishimoto M, Yoshiwara K, Kobayashi M, Kojima M, Sakakibara H, Saito K, Shinozaki K. (2020) Metabolite/phytohormone-gene regulatory networks in soybean organs under dehydration conditions revealed by integration analysis. Plant J. [Epub ahead of print]
Mayla Daiane Correa Molinari, Renata Fuganti-Pagliarini, Silvana Regina Rockenbach Marin, Leonardo Cesar Ferreira, Daniel de Amorim Barbosa, Juliana Marcolino-Gomes, Maria Cristina Neves de Oliveira, Liliane Marcia Mertz-Henning, Norihito Kanamori, Hironori Takasaki, Kaoru Urano, Kazuo Shinozaki, Kazuo Nakashima, Kazuko Yamaguchi-Shinozaki, Alexandre Lima Nepomuceno (2020)
Overexpression of AtNCED3 gene improved drought tolerance in soybean in greenhouse and field conditions. Genetics and molecular biology 43(3) e20190292
Sato H., Takasaki H., Takahashi F., Suzuki T., Iuchi S., Mitsuda N., Ohme-Takagi M., Ikeda M., Seo M., Yamaguchi-Shinozaki K., Shinozaki K. (2018) Arabidopsis thaliana NGATHA1 transcription factor induces ABA biosynthesis by activating NCED3 gene during dehydration stress. Proc Natl Acad Sci U S A. 115, E11178-E11187
髙木教授
Ikeda, M., Mitsuda, N., Ishizuka, T., Satoh M., and Ohme-Takagi, M. (2020). The CIB1 Transcription Factor Regulates light- and Heat-inducible Cell Elongation via a Two-step HLH/bHLH System. Journal of Experimental Botany. DOI: 10.1093/jxb/eraa567
Ikeda, M., Takahashi, M., Fujiwara, S., Mitsuda, N., and Ohme-Takagi, M. (2020). Improving the Efficiency of Adventitious Shoot Induction and Somatic Embryogenesis via Modification of WUSCHEL and LEAFY COTYLEDON 1. Plants (basal) 9(11):1434. doi: 10.3390/plants9111434.
Sato H, Takasaki H, Takahashi F, Suzuki T, Iuchi S, Mitsuda N, Ohme-Takagi M, Ikeda M, Seo M, Yamaguchi-Shinozaki K, Shinozaki K*. (2018) Arabidopsis thaliana NGATHA1 transcription factor induces ABA biosynthesis by activating NCED3gene during dehydration stress. Proc Natl Acad Sci USA. 115:E11178-E11187.
Matsui K, Oshima Y, Mitsuda N, Sakamoto S, Nishiba Y, Walker AR, Ohme-Takagi M, Robinson SP, Yasui Y, Mori M, Takami H. (2018) Buckwheat R2R3 MYB transcription factor FeMYBF1 regulates flavonol biosynthesis. Plant Sci. 274:466-475).
Noshi M, Tanabe N, Okamoto Y, Mori D, Ohme-Takagi M, Tamoi M, Shigeoka S*. (2018) Clade Ib basic helix-loop-helix transcription factor, bHLH101, acts as a regulatory component in photo-oxidative stress responses. Plant Sci. 274:101-108.
Kuroha T, Nagai K, Gamuyao R, Wang DR, Furuta T, Nakamori M, Kitaoka T, Adachi K, Minami A, Mori Y, Mashiguchi K, Seto Y, Yamaguchi S, Kojima M, Sakakibara H, Wu J, Ebana K, Mitsuda N, Ohme-Takagi M, Yanagisawa S, Yamasaki M, Yokoyama R, Nishitani K, Mochizuki T, Tamiya G, McCouch SR, Ashikari M*. (2018) Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding. Science. 361:181-186.
Chuang YC, Hung YC, Hsu CY, Yeh CM, Mitsuda N, Ohme-Takagi M, Tsai WC, Chen WH, Chen HH*. (2018) A Dual Repeat Cis-Element Determines Expression of GERANYL DIPHOSPHATE SYNTHASE for Monoterpene Production in Phalaenopsis Orchids. Front Plant Sci. 9:765.
Kiba T, Inaba J, Kudo T, Ueda N, Konishi M, Mitsuda N, Takiguchi Y, Kondou Y, Yoshizumi T, Ohme-Takagi M, Matsui M, Yano K, Yanagisawa S, Sakakibara H*. (2018) Repression of Nitrogen Starvation Responses by Members of the Arabidopsis GARP-Type Transcription Factor NIGT1/HRS1 Subfamily. Plant Cell. 30: 925-945
西田教授
Negi, J., Munemasa, S., Song, B., Tadakuma, R., Fujita, M., Azoulay-Shemer, T., Engineer, C. B., Kusumi, K., Nishida, I., Schroeder, J. I. and Iba, K. (2018) Eukaryotic lipid metabolic pathway is essential for functional chloroplasts and CO2 and light responses in Arabidopsis guard cells. Proc. Natl. Acad. Sci. USA 115: 9038-9043. doi.org/10.1073/pnas.1810458115
仲本教授              
Akter T, Nakamoto H. (2020) pH-mediated control of anti-aggregation activities of cyanobacterial and E.coli chaperonin GroELs.J Biochem. In press. doi: 10.1093/jb/mvaa108.
Saito M, Watanabe S, Nimura-Matsune K, Yoshikawa H, Nakamoto H. (2020)Regulation of the groESL1 transcription by the HrcA repressor and a novel transcription factor Orf7.5 in the cyanobacterium Synechococcus elongatus PCC7942. J Gen Appl Microbiol. 66, 85-92.
Rastogi RP, Madamwar D, Nakamoto H, Incharoensakdi A. (2020) Resilience and self-regulation processes of microalgae under UV radiation stress. J Photochem Photobiol C. 43, 1-30.
Nakamoto H, Amaya Y, Komatsu T, Suzuki T, Dohmae N, Nakamura Y, Jantan I, Miyata Y. (2018) Stimulation of the ATPase activity of Hsp90 by zerumbone modification of its cysteine residues destabilizes its clients and causes cytotoxicity. Biochem J. 475, 2559-2576.

2. 外部予算の獲得実績

西山教授
科研費(代表)
題目:光合成の強光耐性におけるタンパク質合成系の順化機構の役割
研究期間:2018ー2020
研究種目:基盤研究(C)
受託 未来社会創造事業(分担)
題目:ミルキング法によるバイオ燃料生産の高効率化と安定化
研究期間:2017ー2020
研究種目:科学技術振興機構・未来社会創造事業
受託 水産庁委託事業(分担)
題目:平成31年度漁場環境改善推進事業のうち赤潮被害防止対策技術の開発
研究期間:2019ー2020
研究種目:栄養塩、赤潮・貧酸素共同研究機関
川合教授
科研費(代表)
題目:植物の環境ストレス応答における生体膜マイクロドメインの構築と機能
研究期間:2018ー2021
研究種目:基盤研究(B)
科研費(代表)
題目:植物免疫解明に向けたマイクロドメイン可視化プローブの開発
研究期間:2018ー2020
研究種目:挑戦的研究(萌芽)
科研費(代表)
題目:プロトン駆新学術動力とNAD量的制御のクロストーク
研究期間:2019ー2020
研究種目:新学術領域研究(公募)
科研費(分担)
題目:葉緑体機能を支えるレドックス制御の包括的解析
研究期間:2019ー2022
研究種目:基盤研究(B)
小竹教授
科研費(代表)
題目:植物の光依存的なビタミンC合成に関わる未知制御機構
研究期間:2019ー2021
研究種目:基盤研究(C)
科研費(代表)
題目:植物体のしなやかさを生み出す非セルロース性細胞壁成分の構造力学的・化学的特性
研究期間:2018ー2022
研究種目:新学術領域研究(研究領域提案型)
科研費(分担)
題目:植物細胞壁損傷の感知による植食性昆虫食害の認識機構
   研究代表者:岡山大学・新屋 友規
研究期間:2018ー2020
研究種目:基盤研究(C)
竹澤教授
科研費(代表)
題目:コケ植物を用いたABA、低温および浸透圧応答の統合的制御に関する基礎研究
研究期間:2018ー2019
研究種目:新学術領域研究(公募研究)
山口准教授
科研費(代表)
題目:様々なNACドメイン転写因子と複合体を形成するVNI2の多面的な生物学的役割
研究期間:2017ー2020
研究種目:基盤研究(C)
科研費(分担)
題目:超高感度光干渉法による多元的植物の環境汚染ストレス・活性の無侵襲極短時間モニタ法
研究期間:2019ー2021
研究種目:基盤研究(B)
豊田准教授               
A-STEP(代表)
題目:グルタミン酸受容体を標的としたアミノ酸型バイオスティミュラントの開発
研究期間:2020ー2022
研究種目:A-STEP 産学共同(育成型)、科学技術振興機構
科研費(代表)
題目:張力センサーを用いた細胞壁-細胞膜インターフェイスの構造力学的研究
研究期間:2018ー2022
研究種目:新学術領域研究(研究領域提案型)
科研費(代表)
題目:根-地上部間を伝搬する高速カルシウムシグナルの分子基盤
研究期間:2018ー2019
研究種目:新学術領域研究(研究領域提案型)
科研費(代表)
題目:新規顕微鏡法を用いた植物の重力センサーの解明
研究期間:2017ー2019
研究種目:若手研究(A)
長谷川准教授
科研費(代表)
題目:植物生体電位応答を利用した植物工場内の環境管理・制御システムの開発(国際共同研究強化)
研究期間:2016ー2018
研究種目:国際共同研究加速基金
池田准教授
科研費(代表)
題目:環境シグナルを統合する~bHLH/HLHネットワークによる細胞伸長制御の解析
研究期間:2020ー2022
研究種目:基盤研究(C)
科研費(代表)
題目:胚養育能をもつ受精非依存的胚乳の発生機構
研究期間:2019ー2020
研究種目:新学術領域、公募班(代表)
科研費(分担)
題目:ブラシノステロイド情報伝達ネットワークによる植物成長制御機構の解明
研究期間:2018ー2021
研究種目:基盤研究(B)
石川准教授
科研費(代表)
題目:植物独自のスフィンゴ脂質糖鎖構造多様性が担う生物学的意義の解明
研究期間:2019ー2021
研究種目:基盤研究(C)
宮城助教
科研費(代表)
題目:メタボローム解析から探る稲わら高品質化のためのシュウ酸蓄積分子機構
研究期間:2018ー2020
研究種目:若手研究
高橋拓子助教
科研費(代表)
題目:「プロトン駆動力制御機構の解明と光合成機能増加型植物の作出に向けて」(19H04716)
研究期間:2019ー2020
研究種目:新学術研究領域(公募)
科研費(代表)
題目:「強光下での光化学系I機能維持メカニズムの解明」(18K18561)
研究期間:2018ー2020
研究種目:基盤研究(C)←1年延長申請予定
高橋大輔助教
科研費(代表)
題目:植物プロテオグリカンの構造解明と凍結適応機構への関与
研究期間:2020ー2023
研究種目:若手研究
公益財団法人 市村清新技術財団 (代表)
題目:植物糖タンパク質の網羅的分析法の確立と低温応答解析での実践
研究期間:2020ー2021
研究種目:植物研究助成
フェローシップ
題目:Elucidation of physiological and molecular responses of the extracellular matrix during sub-zero acclimation
研究期間:2017ー2019
研究種目:Alexander von Humboldt Foundation Postdoctoral Fellowship
高崎助教
科研費(代表)
題目:種子肥大化技術開発のための植物細胞伸長機構の解明
研究期間:2018ー2019
研究種目:若手研究B
髙木教授
受託 ALCA(代表)
題目:人為的アポミクシス誘導技術の開発による育種革命
研究期間:2015ー2019
研究種目:先端的低炭素化技術開発(ALCA)、科学技術振興機構
科研費(代表)
題目:植物におけるアポミクシス分子機構の解明
   人為的アポミクシス誘導技術の開発による育種革命
研究期間:2017ー2019
研究種目:挑戦的研究(開拓)
科研費(分担)
題目:研究課題名:ブラシノステロイド情報伝達ネットワークによる植物成長制御機構の解明
研究期間:2018ー2021
研究種目:基盤研究(B)
仲本教授
科研費(代表)
題目:シアノバクテリアにおける新規で必須の分子シャペロン系の解明
研究期間:2018ー2020
研究種目:基盤研究(C)

3. 民間企業との共同研究

川合教授

2020年度  2件
2019年度  2件
2018年度  2件

小竹教授

2020年度  2件
2019年度  4件
2018年度  4件

豊田准教授

2020年度  1件
2019年度  1件
2018年度  1件

長谷川准教授

2019年度  0件(共同研究あるいは受託研究検討中案件:2件)
2018年度  1件(情報共有のみ)

池田准教授

2020年度  2件
2019年度  1件

是枝講師

2019年度  1件(受託研究)(戸田市)
2018年度  1件(受託研究)(戸田市)

石川准教授

2020年度  1件
2019年度  1件